Zm00001e020947_P001 (Zm00001e020947)

Aliases : Zm00001e020947

Description : Putative disease resistance protein RGA4 OS=Solanum bulbocastanum (sp|q7xa39|rga4_solbu : 271.0)

Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e020947_P001
Cluster	HCCA: Cluster_306

Target	Alias	Description	ECC score	Gene Family Method
ChrUn.fgenesh.mRNA.29	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
GSVIVT01012165001	RPM1, RPS3	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01024097001	No alias	Probable disease resistance RPP8-like protein 2...	0.06	OrthoFinder output from all 47 species
GSVIVT01024102001	RPP13	Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana	0.25	OrthoFinder output from all 47 species
GSVIVT01026742001	No alias	Putative disease resistance protein At1g50180...	0.03	OrthoFinder output from all 47 species
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.05	OrthoFinder output from all 47 species
GSVIVT01026910001	No alias	Inactive disease susceptibility protein LOV1...	0.1	OrthoFinder output from all 47 species
GSVIVT01032824001	No alias	Putative disease resistance protein At1g50180...	0.05	OrthoFinder output from all 47 species
GSVIVT01032827001	No alias	Putative disease resistance protein At1g50180...	0.07	OrthoFinder output from all 47 species
GSVIVT01032828001	No alias	Putative disease resistance protein At1g50180...	0.04	OrthoFinder output from all 47 species
LOC_Os01g23380.1	RPP13, LOC_Os01g23380	no description available(sp\|p0do08\|pikm2_orysj : 348.0)	0.03	OrthoFinder output from all 47 species
LOC_Os04g21890.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os04g46300.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
LOC_Os06g22460.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os07g12680.1	LOC_Os07g12680	no description available(sp\|f7j0n2\|rga5r_orysj : 105.0)	0.04	OrthoFinder output from all 47 species
LOC_Os08g14810.1	ZAR1, LOC_Os08g14810	no description available(sp\|p0do08\|pikm2_orysj : 132.0)	0.03	OrthoFinder output from all 47 species
LOC_Os08g28570.1	LOC_Os08g28570	no description available(sp\|q2r8l1\|rga5s_orysj : 394.0)	0.02	OrthoFinder output from all 47 species
LOC_Os09g09490.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
LOC_Os10g03570.1	LOC_Os10g03570	no description available(sp\|q2r8l1\|rga5s_orysj : 283.0)	0.02	OrthoFinder output from all 47 species
LOC_Os11g11990.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
LOC_Os11g12330.1	RPM1, RPS3,...	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
LOC_Os11g12350.1	LOC_Os11g12350	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g16470.2	LOC_Os11g16470	no description available(sp\|q2r8l1\|rga5s_orysj : 400.0)	0.02	OrthoFinder output from all 47 species
LOC_Os11g16510.1	LOC_Os11g16510	no description available(sp\|p0do08\|pikm2_orysj : 87.0)	0.01	OrthoFinder output from all 47 species
LOC_Os12g37760.1	LOC_Os12g37760	no description available(sp\|p0do08\|pikm2_orysj : 370.0)	0.14	OrthoFinder output from all 47 species
Solyc07g053020.3.1	ZAR1, Solyc07g053020	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Solyc08g005440.3.1	RPM1, RPS3,...	RPM1 effector-triggered immunity CC-NLR-type effector receptor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	94	317

External Links

No external refs found!

Zm00001e020947_P001 (Zm00001e020947)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation