Zm00001e021464_P001 (SBH2, Zm00001e021464)

Aliases : SBH2, Zm00001e021464

Description : sphingobase hydroxylase

Gene families : OG0001965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001965_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e021464_P001

Target	Alias	Description	ECC score	Gene Family Method
Aev_g13366	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.02	OrthoFinder output from all 47 species
Ala_g01317	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.02	OrthoFinder output from all 47 species
Als_g38019	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.02	OrthoFinder output from all 47 species
Als_g56562	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Aob_g06585	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Dac_g16085	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.02	OrthoFinder output from all 47 species
GSVIVT01020000001	SBH1	Lipid metabolism.sphingolipid metabolism.sphingobase hydroxylase	0.02	OrthoFinder output from all 47 species
Gb_30409	SBH2	sphingobase hydroxylase	0.03	OrthoFinder output from all 47 species
LOC_Os06g12250.1	SBH2, LOC_Os06g12250	sphingobase hydroxylase	0.06	OrthoFinder output from all 47 species
Len_g08569	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Lfl_g02855	SBH2	EC_1.14 oxidoreductase acting on paired donor with...	0.04	OrthoFinder output from all 47 species
MA_17536g0010	SBH2	sphingobase hydroxylase	0.04	OrthoFinder output from all 47 species
Msp_g01469	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.02	OrthoFinder output from all 47 species
Nbi_g27124	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.05	OrthoFinder output from all 47 species
Ore_g26348	SBH2	EC_1.14 oxidoreductase acting on paired donor with...	0.03	OrthoFinder output from all 47 species
Pnu_g01222	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.05	OrthoFinder output from all 47 species
Ppi_g02798	SBH1	EC_1.14 oxidoreductase acting on paired donor with...	0.04	OrthoFinder output from all 47 species
Smo74254	SBH2	Lipid metabolism.sphingolipid metabolism.sphingobase hydroxylase	0.04	OrthoFinder output from all 47 species
Tin_g01679	SBH1	EC_1.14 oxidoreductase acTing on paired donor with...	0.03	OrthoFinder output from all 47 species
Zm00001e020269_P002	SBH1, Zm00001e020269	sphingobase hydroxylase	0.04	OrthoFinder output from all 47 species
Zm00001e023899_P002	SBH1, Zm00001e023899	sphingobase hydroxylase	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006694	Fatty_acid_hydroxylase	106	241

External Links

No external refs found!

Zm00001e021464_P001 (SBH2, Zm00001e021464)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation