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  5. Zm00001e023068_P001

Zm00001e023068_P001 (Zm00001e023068)


Aliases : Zm00001e023068

Description : GEM-like protein 4 OS=Arabidopsis thaliana (sp|q9fta0|geml4_arath : 174.0)


Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023068_P001
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G28200 FIP1 FH interacting protein 1 0.02 OrthoFinder output from all 47 species
AT4G01600 No alias GRAM domain family protein 0.03 OrthoFinder output from all 47 species
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 OrthoFinder output from all 47 species
AT5G13200 No alias GRAM domain family protein 0.02 OrthoFinder output from all 47 species
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 OrthoFinder output from all 47 species
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.05 OrthoFinder output from all 47 species
AT5G23370 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 OrthoFinder output from all 47 species
Adi_g000554 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11767 GEM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07158 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52647.t1 FIP1, Aspi01Gene52647 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60753.t1 FIP1, Aspi01Gene60753 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01019136001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01034391001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01034396001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00888 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_00889 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42440.1 LOC_Os02g42440 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08860.1 FIP1, LOC_Os03g08860 GEM-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52670.1 FIP1, LOC_Os03g52670 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g44500.1 LOC_Os04g44500 GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g44510.1 LOC_Os04g44510 GEM-like protein 4 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
LOC_Os12g29400.1 LOC_Os12g29400 GEM-like protein 5 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g08110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18424 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g45212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g24833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g26449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434405g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_84315g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_99608g0020 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g07508 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21095 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38114 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098660.3.1 Solyc03g098660 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g078510.3.1 Solyc08g078510 GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g011580.2.1 Solyc11g011580 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc11g011600.3.1 Solyc11g011600 GEM-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g05448 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05449 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20230 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012085_P001 FIP1, Zm00001e012085 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e015212_P001 Zm00001e015212 GEM-like protein 6 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e039556_P001 Zm00001e039556 GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 108 226
No external refs found!