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  5. Zm00001e023144_P001

Zm00001e023144_P001 (ATRAB1B, RABD2A,...)


Aliases : ATRAB1B, RABD2A, ATRABD2A, ARA5, RA-5, ARA-5, Zm00001e023144

Description : D-class RAB GTPase


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023144_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G47200 ATRAB1A, ATRABD2B, RAB1A RAB GTPase homolog 1A 0.03 OrthoFinder output from all 47 species
Adi_g046907 RAB1C, ATRAB1C, ATRABD2C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45762 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001408.10 RAB1C, ATRAB1C, ATRABD2C Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Dac_g26818 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15477 ATRAB1B, RABD2A,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os01g08450.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Mp3g00710.1 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Nbi_g40698 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g14298 ATRAB1B, RABD2A,... D-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g05020 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19661 No alias D-class RAB GTPase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc05g052070.3.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc08g078070.4.1 RAB1C, ATRAB1C,... D-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Tin_g23605 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 79 239
No external refs found!