Zm00001e023299_P002 (RSH3, AT-RSH3,...)

Aliases : RSH3, AT-RSH3, ATRSH3, Zm00001e023299

Description : Probable GTP diphosphokinase RSH3, chloroplastic OS=Arabidopsis thaliana (sp|q9syh1|rsh3c_arath : 161.0)

Gene families : OG0006425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006425_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e023299_P002
Cluster	HCCA: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00048p00155800	RSH3, AT-RSH3,...	Probable GTP diphosphokinase RSH3, chloroplastic...	0.05	OrthoFinder output from all 47 species
Ala_g14803	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g03228	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g06745	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene53678.t1	RSH3, AT-RSH3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene53681.t1	Aspi01Gene53681	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0065.g035826	RSH3, AT-RSH3, ATRSH3	not classified & original description: CDS=635-3163	0.05	OrthoFinder output from all 47 species
Ceric.24G004600.1	AT-RSH2, ATRSH2,...	not classified & original description: pacid=50629860...	0.12	OrthoFinder output from all 47 species
Cre14.g621351	RSH3, AT-RSH3, ATRSH3	Probable GTP diphosphokinase RSH3, chloroplastic...	0.02	OrthoFinder output from all 47 species
Dcu_g12674	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01024422001	RSH3, AT-RSH3, ATRSH3	Probable GTP diphosphokinase RSH3, chloroplastic...	0.1	OrthoFinder output from all 47 species
Gb_38498	RSH3, AT-RSH3, ATRSH3	Probable GTP diphosphokinase RSH3, chloroplastic...	0.1	OrthoFinder output from all 47 species
LOC_Os02g47120.1	RSH3, AT-RSH3,...	Probable GTP diphosphokinase RSH3, chloroplastic...	0.11	OrthoFinder output from all 47 species
Len_g02422	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g06720	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g03900	RSH3, AT-RSH3, ATRSH3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16000	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003951	NAD+ kinase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006741	NADP biosynthetic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	462	580

External Links

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Zm00001e023299_P002 (RSH3, AT-RSH3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation