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  5. Zm00001e023434_P001

Zm00001e023434_P001 (FLA2, Zm00001e023434)


Aliases : FLA2, Zm00001e023434

Description : fasciclin-type arabinogalactan protein


Gene families : OG0000786 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023434_P001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00195530 SOS5,... External stimuli response.salinity.SOS (Salt Overly... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00195790 AGP8, FLA8,... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AT2G45470 AGP8, FLA8 FASCICLIN-like arabinogalactan protein 8 0.03 OrthoFinder output from all 47 species
AT3G46550 SOS5 Fasciclin-like arabinogalactan family protein 0.04 OrthoFinder output from all 47 species
AT5G55730 FLA1 FASCICLIN-like arabinogalactan 1 0.04 OrthoFinder output from all 47 species
Aev_g16402 FLA10 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 OrthoFinder output from all 47 species
Als_g08047 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene57863.t1 AGP8, FLA8,... Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Dac_g00740 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Dac_g13448 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 OrthoFinder output from all 47 species
Ehy_g00931 FLA10 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03525 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09971 FLA7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014684001 FLA1 Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
Gb_12627 FLA10 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g49420.1 FLA2, LOC_Os02g49420 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g03600.1 FLA10, LOC_Os03g03600 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os04g21570.1 FLA10, LOC_Os04g21570 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os05g38500.1 SOS5, LOC_Os05g38500 fasciclin-type arabinogalactan protein. regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44660.1 FLA14, LOC_Os06g44660 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os08g23180.1 FLA2, LOC_Os08g23180 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_177793g0010 FLA2 Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_4482888g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_55418g0010 FLA10 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Nbi_g13163 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 OrthoFinder output from all 47 species
Ore_g44754 FLA14 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Pir_g25092 FLA2 Fasciclin-type arabinogalactan protein & original... 0.03 OrthoFinder output from all 47 species
Ppi_g14087 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016919 FLA10 Fasciclin-type arabinogalactan protein & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020442 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021825 FLA14 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Smo441324 AGP8, FLA8 Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g045440.1.1 FLA2, Solyc07g045440 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc10g005960.1.1 FLA1, Solyc10g005960 fasciclin-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc12g006110.3.1 FLA2, Solyc12g006110 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Spa_g11836 AGP8, FLA8 regulatory factor SOS5 of SOS *(Salt Overly Sensitive)... 0.03 OrthoFinder output from all 47 species
Spa_g13151 FLA10 Fasciclin-type arabinogalactan protein & original... 0.02 OrthoFinder output from all 47 species
Zm00001e027237_P001 SOS5, Zm00001e027237 fasciclin-type arabinogalactan protein. regulatory... 0.03 OrthoFinder output from all 47 species
Zm00001e031109_P001 FLA2, Zm00001e031109 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e031831_P001 SOS5, Zm00001e031831 fasciclin-type arabinogalactan protein. regulatory... 0.05 OrthoFinder output from all 47 species
Zm00001e036843_P001 FLA2, Zm00001e036843 fasciclin-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 214 347
No external refs found!