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  5. Zm00001e023660_P001

Zm00001e023660_P001 (PCNA2, ATPCNA2, Zm00001e023660)


Aliases : PCNA2, ATPCNA2, Zm00001e023660

Description : sliding clamp protein (PCNA)


Gene families : OG0002250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e023660_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259890 ATPCNA1, PCNA1,... Cell cycle.interphase.DNA... 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00198200 ATPCNA1, PCNA1,... Cell cycle.interphase.DNA... 0.04 OrthoFinder output from all 47 species
AT1G07370 ATPCNA1, PCNA1 proliferating cellular nuclear antigen 1 0.08 OrthoFinder output from all 47 species
Adi_g020149 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07143 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.11 OrthoFinder output from all 47 species
Als_g50349 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11632 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28871.t1 ATPCNA1, PCNA1,... sliding clamp protein *(PCNA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47926.t1 ATPCNA1, PCNA1,... sliding clamp protein *(PCNA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09705 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G042200.1 ATPCNA1, PCNA1,... sliding clamp protein *(PCNA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G045300.1 ATPCNA1, PCNA1,... sliding clamp protein *(PCNA) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.141 ATPCNA1, PCNA1 Cell cycle.interphase.DNA... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.67 ATPCNA1, PCNA1 Cell cycle.interphase.DNA... 0.06 OrthoFinder output from all 47 species
Cre12.g515850 ATPCNA1, PCNA1 Cell cycle.interphase.DNA... 0.08 OrthoFinder output from all 47 species
Dac_g03057 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.14 OrthoFinder output from all 47 species
GSVIVT01024815001 PCNA2, ATPCNA2 Cell cycle.interphase.DNA... 0.1 OrthoFinder output from all 47 species
Gb_07434 ATPCNA1, PCNA1 sliding clamp protein (PCNA) 0.05 OrthoFinder output from all 47 species
Gb_11143 ATPCNA1, PCNA1 sliding clamp protein (PCNA) 0.15 OrthoFinder output from all 47 species
LOC_Os02g56130.1 PCNA2, ATPCNA2,... sliding clamp protein (PCNA) 0.12 OrthoFinder output from all 47 species
Len_g11664 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.09 OrthoFinder output from all 47 species
MA_10434805g0020 ATPCNA1, PCNA1 sliding clamp protein (PCNA) 0.03 OrthoFinder output from all 47 species
MA_83835g0010 ATPCNA1, PCNA1 sliding clamp protein (PCNA) 0.09 OrthoFinder output from all 47 species
Mp5g08780.1 ATPCNA1, PCNA1 sliding clamp protein (PCNA) 0.02 OrthoFinder output from all 47 species
Msp_g09130 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g07886 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c4_11630V3.1 ATPCNA1, PCNA1,... proliferating cellular nuclear antigen 1 0.03 OrthoFinder output from all 47 species
Sam_g26451 No alias sliding clamp protein *(PCNA) & original description: none 0.09 OrthoFinder output from all 47 species
Solyc06g076660.3.1 PCNA2, ATPCNA2,... sliding clamp protein (PCNA) 0.12 OrthoFinder output from all 47 species
Spa_g12144 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.17 OrthoFinder output from all 47 species
Spa_g12145 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47454 PCNA2, ATPCNA2 sliding clamp protein *(PCNA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51877 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.14 OrthoFinder output from all 47 species
Tin_g04951 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12734 ATPCNA1, PCNA1 sliding clamp protein *(PCNA) & original description: none 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006275 regulation of DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022649 Pr_cel_nuc_antig_C 127 254
IPR022648 Pr_cel_nuc_antig_N 1 125
No external refs found!