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  5. Zm00001e023726_P001

Zm00001e023726_P001 (At-RSZ22a, RSZ22a,...)


Aliases : At-RSZ22a, RSZ22a, Zm00001e023726

Description : RSZ21/22 RNA splicing factor


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Zm00001e023726_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G24590 At-RSZ22a, RSZ22a RNA recognition motif and CCHC-type zinc finger domains... 0.09 OrthoFinder output from all 47 species
AT4G31580 RSZ22, At-RSZ22,... serine/arginine-rich 22 0.03 OrthoFinder output from all 47 species
Als_g22485 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.04 OrthoFinder output from all 47 species
Cre09.g408200 At-RSZ22a, RSZ22a RNA processing.RNA splicing.spliceosome-associated... 0.07 OrthoFinder output from all 47 species
Dac_g32477 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00843 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41811 At-RSZ22a, RSZ22a not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033172001 At-RSZ22a, RSZ22a RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54770.2 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.04 OrthoFinder output from all 47 species
LOC_Os06g08840.3 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.06 OrthoFinder output from all 47 species
MA_10435943g0010 At-RSZ22a, RSZ22a RSZ21/22 RNA splicing factor 0.04 OrthoFinder output from all 47 species
Nbi_g12317 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44647 No alias RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01672 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 87 102
IPR000504 RRM_dom 4 61
No external refs found!