Aliases : ATL31, CNI1, Zm00001e023832
Description : RING-H2-class E3 ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00185200 | ATL6,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00200880 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00065710 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G42360 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G19140 | DNF | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | OrthoFinder output from all 47 species | |
| AT4G30370 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G05280 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G10380 | ATRING1, RING1 | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G27420 | ATL31, CNI1 | carbon/nitrogen insensitive 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g007002 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02176 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03304 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g28428 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g02285 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g52149 | ATL5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12542.t1 | Aspi01Gene12542 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13378.t1 | Aspi01Gene13378 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene20771.t1 | Aspi01Gene20771 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46827.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene52668.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene66157.t1 | Aspi01Gene66157 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene70839.t1 | Aspi01Gene70839 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033681 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G091800.1 | Ceric.01G091800 | not classified & original description: pacid=50591615... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G080900.1 | Ceric.06G080900 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G061400.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G005300.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g00774 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g42850 | XERICO | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14526 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g30250 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009098001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012020001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01015682001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01019530001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04644 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04645 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04647 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28980 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g11520.1 | LOC_Os01g11520 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g14990.1 | LOC_Os02g14990 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g15060.1 | LOC_Os02g15060 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g45780.1 | LOC_Os02g45780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g46600.1 | LOC_Os02g46600 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g22110.1 | ATL5, LOC_Os03g22110 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g28080.1 | ATL3, LOC_Os03g28080 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g29710.1 | LOC_Os05g29710 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g44950.1 | LOC_Os08g44950 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12736 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23800 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g34104 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g26673 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g39367 | RHA3B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431746g0020 | No alias | RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_308999g0010 | ATL2, TL2 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_391931g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_9764263g0010 | No alias | RING-H2 finger protein ATL67 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g27170.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g36544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19208 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03615 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18004 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43979 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06476 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g44351 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17683 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10849 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g24030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g29641 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g03342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g066430.3.1 | ATL2, TL2, Solyc01g066430 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g095180.2.1 | Solyc01g095180 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g083460.3.1 | Solyc03g083460 | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g112340.1.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g123680.1.1 | Solyc03g123680 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g053640.1.1 | Solyc06g053640 | RING-H2-class E3 ligase | 0.07 | OrthoFinder output from all 47 species | |
| Solyc11g010330.3.1 | Solyc11g010330 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g055710.1.1 | ATL3, Solyc12g055710 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g29342 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30280 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g37346 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008560_P001 | RHA2A, Zm00001e008560 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014286_P001 | Zm00001e014286 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015449_P001 | Zm00001e015449 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016470_P001 | Zm00001e016470 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 128 | 171 |
| No external refs found! |
