1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e024450_P001

Zm00001e024450_P001 (APUM12, PUM12, Zm00001e024450)


Aliases : APUM12, PUM12, Zm00001e024450

Description : Pumilio homolog 12 OS=Arabidopsis thaliana (sp|q9lvc3|pum12_arath : 327.0)


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e024450_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G56510 APUM12, PUM12 pumilio 12 0.04 OrthoFinder output from all 47 species
Aev_g32398 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g63300 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000500 APUM8, PUM8 not classified & original description: CDS=357-1181 0.02 OrthoFinder output from all 47 species
GSVIVT01009020001 PUM7, APUM7 Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g09150.1 PUM7, APUM7,... Putative pumilio homolog 7, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g37090.1 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g19474 PUM7, APUM7 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 581 609
IPR001313 Pumilio_RNA-bd_rpt 612 634
IPR001313 Pumilio_RNA-bd_rpt 511 536
IPR001313 Pumilio_RNA-bd_rpt 547 567
No external refs found!