Zm00001e025012_P001 (Zm00001e025012)

Aliases : Zm00001e025012

Description : component mtRPL7/L12 of large ribosomal subunit proteome

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e025012_P001

Target	Alias	Description	ECC score	Gene Family Method
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.04	OrthoFinder output from all 47 species
Adi_g115710	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01453	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01020	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.34G065900.1	Ceric.34G065900	not classified & original description: pacid=50622739...	0.07	OrthoFinder output from all 47 species
Dac_g02148	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g00728	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_12915	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Gb_26365	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Gb_27679	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
LOC_Os02g10540.1	LOC_Os02g10540	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Lfl_g35843	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_102591g0010	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
MA_137800g0010	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
Mp1g23110.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Nbi_g19634	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g25874	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Solyc02g088760.2.1	Solyc02g088760	component mtRPL7/L12 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008176	tRNA (guanine-N7-)-methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
CC	GO:0033588	elongator holoenzyme complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	124	187

External Links

No external refs found!

Zm00001e025012_P001 (Zm00001e025012)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation