Zm00001e025100_P003 (KNAT3, Zm00001e025100)

Aliases : KNAT3, Zm00001e025100

Description : transcription factor (KNOX)

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e025100_P003

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00162850	KNAT3,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.02	OrthoFinder output from all 47 species
Ala_g21136	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g13096	BUM1, SHL, STM,...	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g31921	KNAT4	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10216	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12299.t1	BP, BP1, KNAT1,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g009595	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: CDS=1-1050	0.02	OrthoFinder output from all 47 species
Cba_g09456	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.21G023400.1	KNAT3, Ceric.21G023400	KNOX-type transcription factor & original description:...	0.07	OrthoFinder output from all 47 species
Dac_g27227	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g36820	KNAT3	KNOX-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g09110	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01004811001	BUM1, SHL, STM,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Gb_33705	KNAT3	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species
Nbi_g05715	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g02102	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g35965	No alias	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g22911	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g40064	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g54752	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	238	277
IPR005539	ELK_dom	198	219
IPR005540	KNOX1	41	78
IPR005541	KNOX2	95	141

External Links

No external refs found!

Zm00001e025100_P003 (KNAT3, Zm00001e025100)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation