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  5. Zm00001e025110_P001

Zm00001e025110_P001 (SPL8, Zm00001e025110)


Aliases : SPL8, Zm00001e025110

Description : transcription factor (SBP)


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025110_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.05 OrthoFinder output from all 47 species
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.03 OrthoFinder output from all 47 species
AT1G53160 SPL4 squamosa promoter binding protein-like 4 0.06 OrthoFinder output from all 47 species
AT3G15270 SPL5 squamosa promoter binding protein-like 5 0.1 OrthoFinder output from all 47 species
AT3G57920 SPL15 squamosa promoter binding protein-like 15 0.05 OrthoFinder output from all 47 species
Aev_g10292 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19260 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27599 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23632.t1 SPL8, Aspi01Gene23632 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26421.t1 SPL8, Aspi01Gene26421 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0147.g053031 SPL8 SBP-type transcription factor & original description: CDS=1-2847 0.02 OrthoFinder output from all 47 species
Azfi_s1820.g107212 No alias not classified & original description: CDS=1-336 0.03 OrthoFinder output from all 47 species
Cba_g06624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G077800.1 SPL3, Ceric.20G077800 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g07628 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18037 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36276 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12026 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13667 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18256 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22348 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09070 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012247001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01021087001 SPL3 RNA biosynthesis.transcriptional activation.SBP... 0.06 OrthoFinder output from all 47 species
Gb_03920 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_03921 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_03922 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_26599 SPL10 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_38014 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g69830.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os04g56170.1 SPL8, LOC_Os04g56170 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
LOC_Os06g44860.1 SPL8, LOC_Os06g44860 transcription factor (SBP) 0.1 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Lfl_g02081 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_20537g0010 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_92489g0010 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29832 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30310 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37276 SPL10 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37559 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48099 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23606 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021215 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Solyc01g090730.3.1 SPL8, Solyc01g090730 transcription factor (SBP) 0.07 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e006686_P001 SPL8, Zm00001e006686 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e010067_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e030416_P001 SPL8, Zm00001e030416 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e035060_P002 SPL4, Zm00001e035060 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e041822_P001 SPL8, Zm00001e041822 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 203 276
No external refs found!