Aliases : Zm00001e025224
Description : component SF3B1 of splicing factor 3B complex
Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G64270 | No alias | splicing factor, putative | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g087263 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104747 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g02669 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10272 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g02393 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g36775 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g71156 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08997 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g25739 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G008400.1 | Ceric.02G008400 | component *(SF3B1) of splicing factor 3B complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000402.41 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g494100 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04130 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g03496 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02942 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025852001 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_12533 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_14294 | No alias | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20157 | No alias | component SF3B1 of splicing factor 3B complex | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g04950.1 | LOC_Os02g04950 | component SF3B1 of splicing factor 3B complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g05310.4 | LOC_Os02g05310 | component SF3B1 of splicing factor 3B complex | 0.12 | OrthoFinder output from all 47 species | |
| Len_g38026 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.02 | OrthoFinder output from all 47 species | |
| MA_11685g0010 | No alias | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g19650.1 | No alias | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11331 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04463 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g13624 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000478 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003182 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g25156 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Smo97336 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g30068 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g02906 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015016 | SF3b_su1 | 298 | 425 |
| No external refs found! |
