1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e025243_P003

Zm00001e025243_P003 (AMS, Zm00001e025243)


Aliases : AMS, Zm00001e025243

Description : transcription factor (bHLH)


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025243_P003
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45944.t1 Aspi01Gene45944 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51705 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07160 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_05276 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_35259 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g23440.1 LOC_Os04g23440 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os10g39750.1 bHLH093, LOC_Os10g39750 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_439607g0010 SCRM2, ICE2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_780853g0010 ATBHLH029,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_833677g0010 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g08918 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g079810.3.1 DYT1, Solyc02g079810 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 366 409
No external refs found!