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  5. Zm00001e025779_P001

Zm00001e025779_P001 (VPS4, SKD1, ATSKD1,...)


Aliases : VPS4, SKD1, ATSKD1, Zm00001e025779

Description : ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex


Gene families : OG0002846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002846_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025779_P001
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Adi_g114328 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.01 OrthoFinder output from all 47 species
Ala_g09447 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000398 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Cba_g13166 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Ceric.04G022900.1 VPS4, SKD1,... EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001126.11 VPS4, SKD1, ATSKD1 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.04 OrthoFinder output from all 47 species
Cre02.g079300 VPS4, SKD1, ATSKD1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
Dcu_g14391 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Dde_g02152 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04814.1 VPS4, SKD1,... ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.13 OrthoFinder output from all 47 species
Mp8g01610.1 VPS4, SKD1, ATSKD1 ATPase component VPS4/SKD1 of VPS4-VTA1 ESCRT-disassembly complex 0.04 OrthoFinder output from all 47 species
Nbi_g04244 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Pir_g01619 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020624 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026926 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acting on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Sam_g37514 No alias EC_3.6 hydrolase acting on acid anhydride & original... 0.05 OrthoFinder output from all 47 species
Tin_g04533 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acTing on acid anhydride & original... 0.04 OrthoFinder output from all 47 species
Tin_g07303 VPS4, SKD1, ATSKD1 EC_3.6 hydrolase acTing on acid anhydride & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 256 385
IPR007330 MIT_dom 94 157
IPR015415 Vps4_C 455 519
No external refs found!