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  5. Zm00001e025897_P001

Zm00001e025897_P001 (Zm00001e025897)


Aliases : Zm00001e025897

Description : Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana (sp|q9lsb8|pp235_arath : 515.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025897_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g034364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30517.t1 CRR22, Aspi01Gene30517 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63387.t1 Aspi01Gene63387 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g007744 No alias not classified & original description: CDS=1-3075 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009216 No alias not classified & original description: CDS=1-2520 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009536 No alias not classified & original description: CDS=1-2379 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026245 No alias not classified & original description: CDS=1-4080 0.02 OrthoFinder output from all 47 species
Azfi_s0072.g036887 EMB2758 not classified & original description: CDS=1-1161 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043491 No alias not classified & original description: CDS=1-2859 0.03 OrthoFinder output from all 47 species
Azfi_s0213.g058286 No alias not classified & original description: CDS=1-3009 0.03 OrthoFinder output from all 47 species
Dcu_g07919 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g15564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g24530.1 LOC_Os11g24530 Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18987 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07842 DOT4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g10880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 241 288
IPR002885 Pentatricopeptide_repeat 110 155
IPR032867 DYW_dom 545 614
IPR002885 Pentatricopeptide_repeat 379 406
IPR002885 Pentatricopeptide_repeat 316 340
IPR002885 Pentatricopeptide_repeat 344 370
IPR002885 Pentatricopeptide_repeat 184 209
IPR002885 Pentatricopeptide_repeat 212 240
IPR002885 Pentatricopeptide_repeat 409 440
No external refs found!