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  5. Zm00001e025924_P001

Zm00001e025924_P001 (LRX2, Zm00001e025924)


Aliases : LRX2, Zm00001e025924

Description : LRR-domain extensin


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e025924_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 OrthoFinder output from all 47 species
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.07 OrthoFinder output from all 47 species
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.05 OrthoFinder output from all 47 species
Als_g03749 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03771 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18015 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01034.t1 LRX2, Aspi01Gene01034 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09207.t1 Aspi01Gene09207 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69387.t1 LRX2, Aspi01Gene69387 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000464 No alias LRR-domain extensin & original description: CDS=1-1719 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013083 LRX2 not classified & original description: CDS=228-2453 0.05 OrthoFinder output from all 47 species
Azfi_s0345.g065781 No alias LRR-domain extensin & original description: CDS=1-1542 0.06 OrthoFinder output from all 47 species
Ceric.24G073600.1 LRX2, Ceric.24G073600 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G025000.1 Ceric.32G025000 LRR-domain extensin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g13913 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32918 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25878 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06799 LRX1 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g58110.1 LOC_Os03g58110 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g49100.1 LRX2, LOC_Os06g49100 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 OrthoFinder output from all 47 species
Ore_g03283 LRX2 LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012995 LRX2 not classified & original description: CDS=401-2401 0.02 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Solyc12g006980.2.1 Solyc12g006980 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Spa_g51371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e031241_P001 Zm00001e031241 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 125 183
No external refs found!