Aliases : Zm00001e026109
Description : component eIF3l of eIF3 mRNA-to-PIC binding complex
Gene families : OG0004705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004705_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e026109_P001 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00109p00071210 | evm_27.TU.AmTr_v1... | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01743 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g00719 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0033.g024996 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.03G028800.1 | Ceric.03G028800 | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00022075.15 | No alias | Protein biosynthesis.translation... | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g697450 | No alias | Protein biosynthesis.translation... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g02249 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05568 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035660001 | No alias | Protein biosynthesis.translation... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07559 | No alias | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g12870.1 | LOC_Os01g12870 | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g13950.1 | LOC_Os05g13950 | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.13 | OrthoFinder output from all 47 species | |
| MA_4833g0010 | No alias | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.04 | OrthoFinder output from all 47 species | |
| MA_4833g0020 | No alias | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_525836g0010 | No alias | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g02920.1 | No alias | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g07862 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3s48_70V3.1 | Pp3s48_70 | RNA polymerase I-associated factor PAF67 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g07496 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26742 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo146079 | No alias | Protein biosynthesis.translation... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc08g068340.3.1 | Solyc08g068340 | component eIF3l of eIF3 mRNA-to-PIC binding complex | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g01339 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g07453 | No alias | component *(eIF3l) of eIF3 mRNA-to-PIC binding complex &... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEA | Interproscan |
| CC | GO:0005737 | cytoplasm | IEA | Interproscan |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006188 | IMP biosynthetic process | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016842 | amidine-lyase activity | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046040 | IMP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019382 | eIF3l | 112 | 509 |
| No external refs found! |
