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  5. Zm00001e027006_P001

Zm00001e027006_P001 (Zm00001e027006)


Aliases : Zm00001e027006

Description : associated component SAP30 of histone deacetylase machineries


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027006_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g009990 No alias associated component *(AFR) of histone deacetylase... 0.05 OrthoFinder output from all 47 species
Adi_g077025 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aev_g02770 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Als_g09801 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aop_g04273 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aop_g26979 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41429.t1 Aspi01Gene41429 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Cba_g19751 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Cba_g50138 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ceric.07G066600.1 Ceric.07G066600 associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Ceric.18G085500.1 Ceric.18G085500 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ceric.28G016000.1 Ceric.28G016000 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dcu_g38581 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ehy_g06059 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
Gb_31640 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
LOC_Os04g08450.3 LOC_Os04g08450 associated component SAP30 of histone deacetylase machineries 0.03 OrthoFinder output from all 47 species
Len_g14311 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Lfl_g18360 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Lfl_g23067 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Mp7g07500.1 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Msp_g09871 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Nbi_g00911 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ore_g01493 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Ore_g05791 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ore_g41852 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Pir_g00552 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Pir_g60562 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Pnu_g00596 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Pnu_g25099 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Sam_g20047 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Solyc08g081310.4.1 Solyc08g081310 associated component SAP30 of histone deacetylase machineries 0.04 OrthoFinder output from all 47 species
Tin_g03746 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 169 221
No external refs found!