Zm00001e027411_P001 (Zm00001e027411)

Aliases : Zm00001e027411

Description : transcription factor (DOF)

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e027411_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264070	CDF3,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00036p00232310	ADOF2, DOF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00059p00213350	ADOF1, DOF1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00119p00099150	CDF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT3G55370	OBP3	OBF-binding protein 3	0.05	OrthoFinder output from all 47 species
AT4G21040	No alias	Dof-type zinc finger domain-containing protein	0.02	OrthoFinder output from all 47 species
AT4G21080	No alias	Dof-type zinc finger domain-containing protein	0.02	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.03	OrthoFinder output from all 47 species
Adi_g113482	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g08332	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.02	OrthoFinder output from all 47 species
Cba_g25585	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g10863	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g11850	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g43968	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g19391	CDF2	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g09129	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12009	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g27889	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002242001	ADOF2, DOF2	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01019969001	CDF1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	OrthoFinder output from all 47 species
Gb_20144	HCA2, DOF5.6	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g15900.1	CDF2, LOC_Os01g15900	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os01g55340.1	LOC_Os01g55340	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
LOC_Os01g64590.1	LOC_Os01g64590	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g47810.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g02150.1	OBP3, LOC_Os05g02150	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g36900.1	LOC_Os05g36900	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g38200.1	LOC_Os12g38200	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Len_g28794	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g27554	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g30870	HCA2, DOF5.6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
MA_7537g0010	TMO6	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
MA_97259g0020	CDF1	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Nbi_g00946	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g04824	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g17212	OBP3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25217	OBP4	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28297	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g32527	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26540	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05155	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31297	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g53347	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715	TMO6	transcription factor *(DOF) & original description: CDS=1-1413	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.03	OrthoFinder output from all 47 species
Solyc03g112930.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc06g071480.3.1	HCA2, DOF5.6,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc06g076030.3.1	Solyc06g076030	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc09g010680.3.1	Solyc09g010680	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc10g086440.2.1	DOF2.4,...	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e004476_P002	Zm00001e004476	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e005107_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e031750_P001	Zm00001e031750	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e035074_P001	TMO6, Zm00001e035074	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	74	127

External Links

No external refs found!

Zm00001e027411_P001 (Zm00001e027411)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation