Zm00001e027598_P001 (Zm00001e027598)


Aliases : Zm00001e027598

Description : no hits & (original description: none)


Gene families : OG0001406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027598_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AT3G45830 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
Adi_g016710 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Adi_g108051 No alias component *(NFRKB2) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Ceric.04G027000.1 Ceric.04G027000 component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000237.41 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g22056 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dcu_g08309 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.11 OrthoFinder output from all 47 species
GSVIVT01025073001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_27287 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g02680.1 LOC_Os05g02680 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Lfl_g05016 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
MA_31242g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g03195 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Pir_g13602 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Sam_g29794 No alias component *(NFRKB1) of INO80 chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Solyc11g072810.2.1 Solyc11g072810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!