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  5. Zm00001e027735_P001

Zm00001e027735_P001 (RAB1C, ATRAB1C,...)


Aliases : RAB1C, ATRAB1C, ATRABD2C, Zm00001e027735

Description : D-class RAB GTPase


Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027735_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G17530 RAB1C, ATRAB1C, ATRABD2C RAB GTPase homolog 1C 0.03 OrthoFinder output from all 47 species
AT5G47200 ATRAB1A, ATRABD2B, RAB1A RAB GTPase homolog 1A 0.04 OrthoFinder output from all 47 species
Aop_g13747 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17692.t1 ATRAB1A,... D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G045700.1 RAB1C, ATRAB1C,... D-class RAB GTPase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.39G002700.1 RAB1C, ATRAB1C,... D-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g560150 ATRAB1A, ATRABD2B, RAB1A Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Dde_g26656 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15477 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os01g37800.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Lfl_g18587 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g00710.1 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Msp_g29525 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18786 ATRAB1A, ATRABD2B, RAB1A D-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17943 RAB1C, ATRAB1C, ATRABD2C D-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014533 RAB1C, ATRAB1C, ATRABD2C not classified & original description: CDS=274-789 0.03 OrthoFinder output from all 47 species
Sam_g19661 No alias D-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g053940.3.1 ATRAB1B, RABD2A,... D-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 170
No external refs found!