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  5. Zm00001e027871_P001

Zm00001e027871_P001 (SNF7.2, VPS32, Zm00001e027871)


Aliases : SNF7.2, VPS32, Zm00001e027871

Description : component VPS32/SNF7 of ESCRT-III complex


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e027871_P001
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Adi_g019235 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Adi_g109174 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Adi_g109176 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Als_g37735 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34363.t1 SNF7.2, VPS32,... component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.37G059500.1 SNF7.2, VPS32,... component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Cre06.g282200 SNF7.2, VPS32 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Len_g03128 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Len_g46200 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g12467 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.04 OrthoFinder output from all 47 species
Nbi_g27598 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g43206 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001279 SNF7.1 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024369 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g34608 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 24 187
No external refs found!