1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e028442_P002

Zm00001e028442_P002 (SPL13, SPL13A, Zm00001e028442)


Aliases : SPL13, SPL13A, Zm00001e028442

Description : transcription factor (SBP)


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028442_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 OrthoFinder output from all 47 species
AT1G27360 SPL11 squamosa promoter-like 11 0.04 OrthoFinder output from all 47 species
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.04 OrthoFinder output from all 47 species
AT2G33810 SPL3 squamosa promoter binding protein-like 3 0.03 OrthoFinder output from all 47 species
Aev_g07305 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38966 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14889 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14890 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04360 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06099 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08975 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13927 No alias SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g25947 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40414 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47037 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14485.t1 SPL3, Aspi01Gene14485 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20298.t1 SPL8, Aspi01Gene20298 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26421.t1 SPL8, Aspi01Gene26421 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32717.t2 SPL2, Aspi01Gene32717 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47643.t1 SPL3, Aspi01Gene47643 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67363.t1 SPL8, Aspi01Gene67363 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001662 SPL7, ATSPL7 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030445 SPL2 SBP-type transcription factor & original description: CDS=29-1837 0.04 OrthoFinder output from all 47 species
Azfi_s0447.g070664 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g19012 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G025600.1 SPL3, Ceric.25G025600 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.29G007700.1 SPL2, Ceric.29G007700 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cre02.g104700 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Cre02.g112750 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Cre10.g433350 SPL4 RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Dac_g11125 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16262 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12554 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18765 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03805 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04651 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09070 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23373 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_22010 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_23724 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_38014 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g56170.1 SPL8, LOC_Os04g56170 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os06g44860.1 SPL8, LOC_Os06g44860 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os08g41940.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g30370.1 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Lfl_g34702 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10049111g0010 SPL7, ATSPL7 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11437 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12140 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32603 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43322 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14903 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43554 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32512 SPL10 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49101 SPL7, ATSPL7 regulatory protein *(SPL7) of copper homeostasis &... 0.03 OrthoFinder output from all 47 species
Ppi_g63266 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256 SPL2 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010846 SPL8 SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011736 SPL2 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971 SPL8 SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Smo79699 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g13068 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14278 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e013198_P001 SPL2, Zm00001e013198 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e018817_P003 SPL13, SPL13A,... transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e021425_P001 SPL13, SPL13A,... transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e034537_P001 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e034628_P001 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e035060_P002 SPL4, Zm00001e035060 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e041526_P001 SPL3, Zm00001e041526 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 81 154
No external refs found!