Aliases : ATUBC11, UBC11, Zm00001e028859
Description : conjugation E2 protein
Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e028859_P002 | |
| Cluster | HCCA: Cluster_129 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00089p00061940 | UBC10,... | Protein degradation.peptide... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g076665 | UBC30 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06450 | UBC9 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39862 | ATUBC11, UBC11 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g39881 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g46782 | ATUBC11, UBC11 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06516 | EMB144, CIN4, COP10, FUS9 | component *(COP10) of CDDD substrate adaptor module of... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09895 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043330 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g70824 | UBC9 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g71490 | ATUBC11, UBC11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.23G049000.1 | UBC9, Ceric.23G049000 | E2 MUB ubiquitin-conjugating enzyme & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g292800 | UBC30 | Protein degradation.peptide... | 0.04 | OrthoFinder output from all 47 species | |
| Cre16.g693700 | UBC10 | Protein degradation.peptide... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g46227 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10818 | UBC10 | conjugation E2 protein | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g60410.3 | ATUBC11, UBC11,... | conjugation E2 protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g16040.1 | UBC10, LOC_Os02g16040 | conjugation E2 protein | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g30970.1 | UBC10, LOC_Os06g30970 | conjugation E2 protein | 0.09 | OrthoFinder output from all 47 species | |
| Len_g14393 | ATUBC11, UBC11 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g28801 | EMB144, CIN4, COP10, FUS9 | component *(COP10) of CDDD substrate adaptor module of... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g31742 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g18170.1 | ATUBC11, UBC11 | conjugation E2 protein | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g27375 | UBC9 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03936 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g34310 | ATUBC11, UBC11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006304 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0081.g018057 | UBC10 | E2 MUB ubiquitin-conjugating enzyme & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48365 | No alias | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g007510.3.1 | UBC10, Solyc06g007510 | conjugation E2 protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g081945.1.1 | UBC10, Solyc08g081945 | conjugation E2 protein | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g35317 | ATUBC11, UBC11 | E2 MUB ubiquitin-conjugating enzyme & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g36347 | UBC3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000608 | UBQ-conjugat_E2 | 5 | 141 |
| No external refs found! |
