Zm00001e028863_P001 (Zm00001e028863)

Aliases : Zm00001e028863

Description : KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica (sp|q75gr5|spin1_orysj : 296.0)

Gene families : OG0001245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001245_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e028863_P001
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g60260.2	LOC_Os01g60260	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
LOC_Os05g40290.1	LOC_Os05g40290	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
LOC_Os07g12490.1	LOC_Os07g12490	KH domain-containing protein SPIN1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	142	184
IPR032377	STAR_dimer	32	74

External Links

No external refs found!