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  5. Zm00001e028880_P001

Zm00001e028880_P001 (Zm00001e028880)


Aliases : Zm00001e028880

Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e028880_P001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00228410 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00002p00240480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
AMTR_s00013p00038620 LTPG1,... Cell wall.cutin and suberin.export.LTPG cuticular lipid... 0.04 OrthoFinder output from all 47 species
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT1G73550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT2G27130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT3G22580 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.08 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
Adi_g116254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41189 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02338.t1 Aspi01Gene02338 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03812.t1 Aspi01Gene03812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12060.t1 Aspi01Gene12060 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene29219.t1 Aspi01Gene29219 arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34239.t1 Aspi01Gene34239 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene50807.t1 Aspi01Gene50807 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55567.t1 Aspi01Gene55567 arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68013.t1 Aspi01Gene68013 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010617 No alias not classified & original description: CDS=72-464 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.11 OrthoFinder output from all 47 species
Azfi_s0054.g033619 No alias not classified & original description: CDS=1-465 0.05 OrthoFinder output from all 47 species
Azfi_s0204.g057707 No alias not classified & original description: CDS=495-1133 0.03 OrthoFinder output from all 47 species
Azfi_s0803.g087563 No alias arabinogalactan protein *(Xylogen) & original... 0.09 OrthoFinder output from all 47 species
Cba_g01588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.06 OrthoFinder output from all 47 species
Ceric.05G095500.1 Ceric.05G095500 not classified & original description: pacid=50577222... 0.06 OrthoFinder output from all 47 species
Ceric.12G092300.1 Ceric.12G092300 not classified & original description: pacid=50600852... 0.03 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.02 OrthoFinder output from all 47 species
Ceric.32G069900.1 Ceric.32G069900 not classified & original description: pacid=50597379... 0.02 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.03 OrthoFinder output from all 47 species
Dac_g08118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09538 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04455 No alias arabinogalactan protein *(Xylogen) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01025408001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01032956001 No alias Lipid transfer-like protein VAS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01917 No alias classical arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_02441 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_02446 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Gb_02455 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_06123 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_08579 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_13133 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_33141 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os03g07100.1 LOC_Os03g07100 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os03g20760.1 LOC_Os03g20760 xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os03g57980.1 LOC_Os03g57980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g37280.1 LOC_Os11g37280 Non-specific lipid-transfer protein C6 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g06139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_113140g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
MA_139470g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_383975g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_43542g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_503350g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
MA_64802g0020 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_7179847g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_76307g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Msp_g06695 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008667 No alias not classified & original description: CDS=1-402 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014611 No alias arabinogalactan protein *(Xylogen) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2896.g028490 No alias not classified & original description: CDS=1-624 0.02 OrthoFinder output from all 47 species
Sam_g02332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005985.1.1 Solyc01g005985 xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Solyc01g073680.4.1 Solyc01g073680 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g119620.1.1 Solyc03g119620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc06g054060.1.1 Solyc06g054060 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc06g069110.4.1 Solyc06g069110 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g065410.4.1 Solyc09g065410 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g065420.3.1 Solyc09g065420 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc11g072030.3.1 Solyc11g072030 xylogen-type arabinogalactan protein 0.1 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13589 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Zm00001e001853_P001 Zm00001e001853 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005336_P001 Zm00001e005336 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e007897_P001 Zm00001e007897 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e010812_P001 Zm00001e010812 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 36 125
No external refs found!