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  5. Zm00001e029052_P001

Zm00001e029052_P001 (HSFA4C, RHA1,...)


Aliases : HSFA4C, RHA1, AT-HSFA4C, Zm00001e029052

Description : transcription factor (HSF)


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029052_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00209530 HSFA1E,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
AMTR_s00176p00024870 HSFA1B, ATHSF3,... Heat stress transcription factor A-1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AMTR_s00176p00025440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
AT2G26150 HSFA2, ATHSFA2 heat shock transcription factor A2 0.03 OrthoFinder output from all 47 species
AT3G02990 HSFA1E, ATHSFA1E heat shock transcription factor A1E 0.03 OrthoFinder output from all 47 species
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.04 OrthoFinder output from all 47 species
AT5G62020 AT-HSFB2A, HSFB2A heat shock transcription factor B2A 0.04 OrthoFinder output from all 47 species
Adi_g075153 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085653 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115583 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17393 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18842 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06411 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10108 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11294 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12580 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51704 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52565 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05891 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01767 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19456 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02993.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34153.t1 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45768.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15368 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78307 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G009100.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.15G074700.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cre07.g354500 HSFB4, SCZ, AT-HSFB4 RNA biosynthesis.transcriptional activation.HSF (heat... 0.01 OrthoFinder output from all 47 species
Dac_g13968 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33781 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03864 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00786 HSFA1E, ATHSFA1E transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20865 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21083 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020781001 HSFA4C, RHA1, AT-HSFA4C RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
GSVIVT01021269001 HSF A4A, AT-HSFA4A RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
GSVIVT01022134001 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
Gb_11758 AT-HSFA6B, HSFA6B transcription factor (HSF). transcriptional regulator (HsfA1) 0.02 OrthoFinder output from all 47 species
LOC_Os02g32590.1 HSFA3, AT-HSFA3,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g12370.1 HSFA1B, ATHSF3,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g48030.1 AT-HSFB2B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g45410.1 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28340.1 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Len_g10124 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27595 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_110587g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
MA_5374g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Msp_g11547 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19596 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21406 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24815 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06498 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11679 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14485 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36415 AT-HSFB2B, HSFB2B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08271 HSFA1B, ATHSF3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16910 No alias HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g072000.3.1 HSF A4A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc02g090820.3.1 HSF4, HSFB1,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc03g026020.3.1 AT-HSFB2A,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc08g076590.3.1 HSFA1B, ATHSF3,... transcription factor (HSF). transcriptional regulator (HsfA1) 0.04 OrthoFinder output from all 47 species
Solyc09g059520.3.1 HSFA8, AT-HSFA8,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Spa_g10058 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11248 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26714 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g33204 ATHSFA1D, HSFA1D HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38102 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024268_P001 AT-HSFB2A,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 10 99
No external refs found!