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  5. Zm00001e029128_P001

Zm00001e029128_P001 (FED A, ATFD2, Zm00001e029128)


Aliases : FED A, ATFD2, Zm00001e029128

Description : ferredoxin electron carrier


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029128_P001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00129320 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.19 OrthoFinder output from all 47 species
AT1G60950 FED A, ATFD2 2Fe-2S ferredoxin-like superfamily protein 0.15 OrthoFinder output from all 47 species
Aev_g01896 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Aev_g42524 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Aob_g10567 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Aob_g13116 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Aob_g16047 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Aob_g32125 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Aop_g05087 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.14 OrthoFinder output from all 47 species
Aop_g28921 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50595.t1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g009850 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G078000.1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.16 OrthoFinder output from all 47 species
Cre14.g626700 FD1, ATFD1 Photosynthesis.photophosphorylation.linear electron... 0.17 OrthoFinder output from all 47 species
Dac_g14348 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Dac_g14349 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.1 OrthoFinder output from all 47 species
Dcu_g38810 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Dcu_g50350 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.18 OrthoFinder output from all 47 species
Ehy_g01897 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ehy_g26325 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Gb_22108 No alias ferredoxin electron carrier 0.13 OrthoFinder output from all 47 species
Gb_25335 FED A, ATFD2 ferredoxin electron carrier 0.07 OrthoFinder output from all 47 species
LOC_Os08g01380.1 FED A, ATFD2,... ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Len_g05004 ATFD3, FD3 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Len_g09860 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Len_g50497 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Len_g55855 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Lfl_g20268 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Mp2g15250.1 FD1, ATFD1 ferredoxin electron carrier 0.2 OrthoFinder output from all 47 species
Msp_g05782 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Nbi_g18589 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ore_g14958 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.08 OrthoFinder output from all 47 species
Pir_g11037 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Pnu_g07739 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Pnu_g29158 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Pp3c4_8330V3.1 FED A, ATFD2, Pp3c4_8330 2Fe-2S ferredoxin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Ppi_g00520 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ppi_g19342 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ppi_g20441 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g23088 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62420 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Smo166487 FED A, ATFD2 Photosynthesis.photophosphorylation.linear electron... 0.02 OrthoFinder output from all 47 species
Smo236581 FED A, ATFD2 Photosynthesis.photophosphorylation.linear electron... 0.07 OrthoFinder output from all 47 species
Solyc10g044520.3.1 FED A, ATFD2,... ferredoxin electron carrier 0.13 OrthoFinder output from all 47 species
Tin_g12716 ATFD3, FD3 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Tin_g21014 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 106 179
No external refs found!