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  5. Zm00001e029710_P001

Zm00001e029710_P001 (ATCYP20-2, CYP20-2,...)


Aliases : ATCYP20-2, CYP20-2, Zm00001e029710

Description : component PnsL5 of NDH lumen subcomplex L. protein folding catalyst


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e029710_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00225920 ATCYP20-2,... Protein modification.protein folding and quality... 0.05 OrthoFinder output from all 47 species
AT3G62030 ROC4 rotamase CYP 4 0.12 OrthoFinder output from all 47 species
AT5G13120 ATCYP20-2, CYP20-2 cyclophilin 20-2 0.1 OrthoFinder output from all 47 species
Ala_g12028 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34444.t1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012462 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=264-1001 0.02 OrthoFinder output from all 47 species
Azfi_s1227.g099989 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=45-827 0.04 OrthoFinder output from all 47 species
Azfi_s1815.g107154 No alias EC_5.2 cis-trans-isomerase & original description: CDS=1-771 0.02 OrthoFinder output from all 47 species
Ceric.24G043400.1 ATCYP20-2,... EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.30 ROC5, ATCYP1 Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cre13.g588100 ROC2 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Dcu_g04517 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46626 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02019 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g11262 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028226001 ROC4 Protein modification.protein folding and quality... 0.22 OrthoFinder output from all 47 species
Gb_11317 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.05 OrthoFinder output from all 47 species
LOC_Os05g01270.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.2 OrthoFinder output from all 47 species
Len_g11459 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15569 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02684 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Mp7g15930.1 ATCYP20-2, CYP20-2 component PnsL5 of NDH lumen subcomplex L. protein... 0.14 OrthoFinder output from all 47 species
Pnu_g06057 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005017 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: CDS=32-877 0.05 OrthoFinder output from all 47 species
Sam_g15123 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g15124 No alias EC_5.2 cis-trans-isomerase & original description: none 0.06 OrthoFinder output from all 47 species
Solyc01g009990.3.1 ATCYP20-2,... component PnsL5 of NDH lumen subcomplex L. protein... 0.13 OrthoFinder output from all 47 species
Solyc11g006070.3.1 Solyc11g006070 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Spa_g14689 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 100 246
No external refs found!