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  5. Zm00001e030045_P004

Zm00001e030045_P004 (Zm00001e030045)


Aliases : Zm00001e030045

Description : no hits & (original description: none)


Gene families : OG0001410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030045_P004
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00151130 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G33290 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
AT1G73170 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
Adi_g088713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108757 SPD1 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g112939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12619 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02605 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07290 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g15207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18245 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03538 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15547 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24193.t1 Aspi01Gene24193 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024929 No alias not classified & original description: CDS=579-2060 0.03 OrthoFinder output from all 47 species
Cba_g18558 SPD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G016100.1 Ceric.08G016100 not classified & original description: pacid=50637973... 0.09 OrthoFinder output from all 47 species
Ceric.34G074300.1 SPD1, Ceric.34G074300 not classified & original description: pacid=50622982... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.19 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre16.g676850 SPD1 No description available 0.02 OrthoFinder output from all 47 species
Dac_g01740 SPD1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g05731 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11178 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02694 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g18471 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10727 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g06190.1 LOC_Os06g06190 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os12g10640.1 LOC_Os12g10640 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g18297 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427944g0010 SPD1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10433286g0010 SPD1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g22990.1 SPD1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g02253 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08814 SPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08230 SPD1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g09739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48536 SPD1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo410877 SPD1 No description available 0.03 OrthoFinder output from all 47 species
Solyc12g014150.3.1 Solyc12g014150 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g26580 SPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 200 286
No external refs found!