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  5. Zm00001e030085_P001

Zm00001e030085_P001 (Zm00001e030085)


Aliases : Zm00001e030085

Description : no hits & (original description: none)


Gene families : OG0001442 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030085_P001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00252730 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00054230 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT1G45688 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
AT3G08490 No alias BEST Arabidopsis thaliana protein match is: Late... 0.09 OrthoFinder output from all 47 species
AT3G24605 No alias No description available 0.05 OrthoFinder output from all 47 species
AT4G35170 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Adi_g007986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g59912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0117.g046456 No alias not classified & original description: CDS=162-1187 0.05 OrthoFinder output from all 47 species
Cba_g07489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G076700.1 Ceric.01G076700 not classified & original description: pacid=50591443... 0.04 OrthoFinder output from all 47 species
Ceric.24G024200.1 Ceric.24G024200 not classified & original description: pacid=50628716... 0.02 OrthoFinder output from all 47 species
Dac_g09294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25242 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017064001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_38619 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g44740.1 LOC_Os02g44740 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g59330.1 LOC_Os04g59330 microtubule-interacting component CC of cellulose... 0.1 OrthoFinder output from all 47 species
Len_g08351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10227167g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8816169g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g12850.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g12420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g43410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g14708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c16_7260V3.1 Pp3c16_7260 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Ppi_g02766 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g62547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008965 No alias not classified & original description: CDS=1104-2096 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018396 No alias not classified & original description: CDS=285-692 0.05 OrthoFinder output from all 47 species
Sam_g08763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75450 No alias No description available 0.06 OrthoFinder output from all 47 species
Solyc01g087140.4.1 Solyc01g087140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g120710.2.1 Solyc03g120710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc04g078750.3.1 Solyc04g078750 microtubule-interacting component CC of cellulose... 0.06 OrthoFinder output from all 47 species
Solyc11g042880.3.1 Solyc11g042880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g24382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007480_P002 Zm00001e007480 microtubule-interacting component CC of cellulose... 0.1 OrthoFinder output from all 47 species
Zm00001e015379_P001 Zm00001e015379 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040882_P001 Zm00001e040882 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 192 295
No external refs found!