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  5. Zm00001e030436_P001

Zm00001e030436_P001 (RUB1, ATRUB1, NEDD8,...)


Aliases : RUB1, ATRUB1, NEDD8, Zm00001e030436

Description : ubiquitin-fold protein (UBQ). ubiquitin-fold protein (RUB)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030436_P001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Aev_g34396 UBQ12 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g09130 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78039 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44728 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g48344 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Smo162003 UBQ14 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Zm00001e009126_P001 UBQ11, Zm00001e009126 Polyubiquitin (Fragment) OS=Acetabularia peniculus... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 79 150
IPR000626 Ubiquitin-like_dom 3 73
No external refs found!