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  5. Zm00001e031516_P001

Zm00001e031516_P001 (Zm00001e031516)


Aliases : Zm00001e031516

Description : IMB1 nucleocytoplasmic import karyopherin


Gene families : OG0001300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031516_P001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00252p00011130 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
AT3G08943 No alias ARM repeat superfamily protein 0.09 OrthoFinder output from all 47 species
Ala_g09011 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Als_g06365 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Als_g27083 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g16372 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G004800.1 Ceric.10G004800 nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.90 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
Cre01.g034000 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Dac_g07112 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.03 OrthoFinder output from all 47 species
Gb_36673 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
LOC_Os05g28510.4 LOC_Os05g28510 IMB1 nucleocytoplasmic import karyopherin 0.1 OrthoFinder output from all 47 species
MA_34778g0010 No alias IMB1 nucleocytoplasmic import karyopherin 0.03 OrthoFinder output from all 47 species
Ore_g30274 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g12426 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species
Tin_g04168 No alias nucleocytoplasmic import karyopherin *(IMB1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 21 101
No external refs found!