Aliases : Zm00001e031570
Description : component psRPL1 of large ribosomal subunit proteome
Gene families : OG0002232 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002232_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00107p00035950 | evm_27.TU.AmTr_v1... | Protein biosynthesis.organelle translation... | 0.14 | OrthoFinder output from all 47 species | |
| AT3G63490 | No alias | Ribosomal protein L1p/L10e family | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g083284 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g11306 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13358 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g06949 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g31675 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11179 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene55148.t1 | Aspi01Gene55148 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035757 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g25894 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G042400.1 | Ceric.36G042400 | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Cre02.g088900 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g00779 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g06155 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g12366 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01032196001 | No alias | Protein biosynthesis.organelle translation... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_16169 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os05g32220.1 | LOC_Os05g32220 | component psRPL1 of large ribosomal subunit proteome | 0.19 | OrthoFinder output from all 47 species | |
| Len_g24587 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03897 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g19309 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| MA_10002614g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| MA_310797g0010 | No alias | 50S ribosomal protein L1, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g07500.1 | No alias | component psRPL1 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g12689 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11958 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g28354 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Pir_g01275 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c23_11170V3.1 | Pp3c23_11170 | Ribosomal protein L1p/L10e family | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41124 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0154.g023589 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18339 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Smo143134 | No alias | Protein biosynthesis.organelle translation... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g16769 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g00638 | No alias | component *(uL1c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR028364 | Ribosomal_L1/biogenesis | 138 | 327 |
| No external refs found! |
