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  5. Zm00001e031805_P001

Zm00001e031805_P001 (Zm00001e031805)


Aliases : Zm00001e031805

Description : no hits & (original description: none)


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031805_P001
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT5G59000 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G60580 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
Aob_g15074 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0096.g043766 No alias not classified & original description: CDS=488-1357 0.03 OrthoFinder output from all 47 species
Ceric.06G036800.1 Ceric.06G036800 not classified & original description: pacid=50620077... 0.03 OrthoFinder output from all 47 species
GSVIVT01016394001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01025179001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os04g01490.1 LOC_Os04g01490 RING-v-class E3 ligase 0.07 OrthoFinder output from all 47 species
Pir_g14219 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31283 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50084 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g007680.4.1 Solyc09g007680 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Solyc11g069350.2.1 Solyc11g069350 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g55685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 128 179
No external refs found!