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  5. Zm00001e032121_P001

Zm00001e032121_P001 (PDCB1, Zm00001e032121)


Aliases : PDCB1, Zm00001e032121

Description : Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana (sp|q9zu91|e133_arath : 80.9)


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032121_P001
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00090370 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00136030 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00092p00035570 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.08 OrthoFinder output from all 47 species
AT1G78520 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G03505 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G08000 PDCB2, E13L3 glucan endo-1,3-beta-glucosidase-like protein 3 0.04 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G61130 PDCB1 plasmodesmata callose-binding protein 1 0.06 OrthoFinder output from all 47 species
Aev_g18704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27838 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene17170.t1 Aspi01Gene17170 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48986.t1 Aspi01Gene48986 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69675.t1 Aspi01Gene69675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046176 No alias not classified & original description: CDS=153-617 0.03 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.05 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G008700.1 Ceric.05G008700 not classified & original description: pacid=50577231... 0.03 OrthoFinder output from all 47 species
Ceric.09G086200.1 Ceric.09G086200 not classified & original description: pacid=50588590... 0.03 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.06 OrthoFinder output from all 47 species
Ceric.36G000700.1 Ceric.36G000700 not classified & original description: pacid=50569024... 0.06 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00456 PDCB2, E13L3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g27433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.08 OrthoFinder output from all 47 species
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_10965 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_15821 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g29980.1 LOC_Os02g29980 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os03g54910.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
LOC_Os05g43690.1 LOC_Os05g43690 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g53541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Msp_g07659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g45427 PDCB2, E13L3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g55633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024478 No alias not classified & original description: CDS=949-2307 0.02 OrthoFinder output from all 47 species
Solyc01g010310.4.1 Solyc01g010310 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g058080.3.1 Solyc04g058080 Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g012380.3.1 PDCB4, Solyc05g012380 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g012580.2.1 Solyc11g012580 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g06484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016347_P001 Zm00001e016347 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
Zm00001e022608_P001 Zm00001e022608 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e035487_P001 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038052_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 21 91
No external refs found!