Aliases : DDB1A, Zm00001e032569
Description : component DDB1 of UV-damaged DNA-binding protein (UV-DDB) heterodimer. core adaptor component DDB1 of COP10-DET1 (CDD) subcomplex. core adapter component (DDB1) of CUL4-DDB1 ubiquitination complex
Gene families : OG0004030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e032569_P002 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G05420 | DDB1A | damaged DNA binding protein 1A | 0.03 | OrthoFinder output from all 47 species | |
| AT4G21100 | DDB1B | damaged DNA binding protein 1B | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03248 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09805 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01666 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021587001 | DDB1A | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15533 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g021650.3.1 | DDB1A, Solyc02g021650 | component DDB1 of UV-damaged DNA-binding protein... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g04425 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01283 | DDB1A | core adaptor component *(DDB1) of CUL4-based E3... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004871 | Cleavage/polyA-sp_fac_asu_C | 751 | 1062 |
| No external refs found! |
