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  5. Zm00001e032697_P002

Zm00001e032697_P002 (Zm00001e032697)


Aliases : Zm00001e032697

Description : 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana (sp|q84p23|4cll9_arath : 404.0)


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032697_P002
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Adi_g015908 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10320 ACOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20640 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62669 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28355 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g35575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04706 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g17970.1 LOC_Os07g17970 4-coumarate--CoA ligase-like 7 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Len_g07586 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02184 OPCL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo268211 OPCL1 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g12748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 65 456
IPR025110 AMP-bd_C 465 542
No external refs found!