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  5. Zm00001e032874_P003

Zm00001e032874_P003 (ATHDA15, HDA15, Zm00001e032874)


Aliases : ATHDA15, HDA15, Zm00001e032874

Description : class-II histone deacetylase


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032874_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00175p00021990 ATHDA15, HDA15,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
AT5G61060 ATHDA5, HDA05, HDA5 histone deacetylase 5 0.02 OrthoFinder output from all 47 species
Adi_g055256 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18380 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29852 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0242.g059804 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: CDS=132-2222 0.03 OrthoFinder output from all 47 species
Ceric.18G066800.1 ATHDA15, HDA15,... class-II histone deacetylase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.133 ATHDA5, HDA05, HDA5 Histone deacetylase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g01843 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14604 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19491 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.08 OrthoFinder output from all 47 species
LOC_Os07g41090.1 ATHDA5, HDA05,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
Lfl_g05654 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g20110.1 ATHDA15, HDA15 class-II histone deacetylase 0.04 OrthoFinder output from all 47 species
Ore_g37045 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17268 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49320 No alias class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 226 515
No external refs found!