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  5. Zm00001e033486_P001

Zm00001e033486_P001 (VFB1, Zm00001e033486)


Aliases : VFB1, Zm00001e033486

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Zm00001e033486_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00198p00016850 VFB3,... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AT1G47056 VFB1 VIER F-box proteine 1 0.03 OrthoFinder output from all 47 species
Adi_g024460 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g087868 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g105463 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0088.g042527 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ceric.20G073200.1 VFB4, SKIP2,... substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
GSVIVT01000227001 VFB2 Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_13260 VFB3 component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
MA_10431549g0010 VFB4, SKIP2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06190 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g18161 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g12691 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Spa_g25961 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 77 106
No external refs found!