Zm00001e033860_P001 (ATWRKY30, WRKY30,...)

Aliases : ATWRKY30, WRKY30, Zm00001e033860

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e033860_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00228580	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00015p00229650	WRKY53,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Adi_g052345	WRKY26	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g111187	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117328	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g02563	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g37874	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g21471	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25064	WRKY26	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g39081	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035963	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: CDS=1-801	0.05	OrthoFinder output from all 47 species
Azfi_s0925.g092890	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: CDS=1-720	0.03	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g30094	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03867	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08194	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g30999	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_00545	WRKY53, ATWRKY53	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_08731	ATWRKY57, WRKY57	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Gb_39366	WRKY31, ATWRKY31	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g43560.1	LOC_Os02g43560	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g04640.1	WRKY42,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g46020.1	ATWRKY50,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
LOC_Os05g49620.1	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os09g16510.1	WRKY46,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_2290g0010	ATWRKY30, WRKY30	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp1g08960.1	WRKY53, ATWRKY53	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Mp1g24950.1	ATWRKY64, WRKY64	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Mp7g06550.1	ATWRKY57, WRKY57	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Msp_g35939	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g38797	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18275	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g63185	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0177.g024646	WRKY4	WRKY-type transcription factor & original description: CDS=1-1935	0.02	OrthoFinder output from all 47 species
Sam_g05178	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo29146	WRKY6, ATWRKY6	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
Solyc05g012500.3.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g07958	WRKY67, ATWRKY67	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	109	168

External Links

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Zm00001e033860_P001 (ATWRKY30, WRKY30,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation