Zm00001e034336_P001 (HSFB4, SCZ, AT-HSFB4,...)

Aliases : HSFB4, SCZ, AT-HSFB4, Zm00001e034336

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e034336_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00209530	HSFA1E,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AT1G46264	HSFB4, SCZ, AT-HSFB4	heat shock transcription factor B4	0.04	OrthoFinder output from all 47 species
AT3G63350	HSFA7B, AT-HSFA7B	winged-helix DNA-binding transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.02	OrthoFinder output from all 47 species
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.02	OrthoFinder output from all 47 species
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	OrthoFinder output from all 47 species
Adi_g036860	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058298	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g12580	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g18442	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g22732	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07805	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g59731	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g08806	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene69372.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g78307	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.29G078200.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g36452	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g21083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01020781001	HSFA4C, RHA1, AT-HSFA4C	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01033257001	AT-HSFB3, HSFB3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
Gb_00558	HSFA1B, ATHSF3,...	transcription factor (HSF). transcriptional regulator (HsfA1)	0.03	OrthoFinder output from all 47 species
Gb_11758	AT-HSFA6B, HSFA6B	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	OrthoFinder output from all 47 species
LOC_Os03g53340.2	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os06g36930.1	AT-HSFA7A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g44690.1	HSFB4, SCZ,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
LOC_Os09g28200.1	HSFB4, SCZ,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Lfl_g38313	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g18363	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g19936	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g12599	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000353	HSFA1E, ATHSFA1E	HSF-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012750	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-2229	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021246	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1665	0.04	OrthoFinder output from all 47 species
Smo92634	HSFB4, SCZ, AT-HSFB4	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Solyc02g090820.3.1	HSF4, HSFB1,...	transcription factor (HSF)	0.05	OrthoFinder output from all 47 species
Solyc04g078770.4.1	HSFB4, SCZ,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Solyc06g053960.3.1	AT-HSFA6B,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc07g055710.3.1	HSFA4C, RHA1,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Spa_g11248	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g26714	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g28879	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g33204	ATHSFA1D, HSFA1D	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g38102	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001765_P002	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	25	115

External Links

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Zm00001e034336_P001 (HSFB4, SCZ, AT-HSFB4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation