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  5. Zm00001e034605_P003

Zm00001e034605_P003 (Zm00001e034605)


Aliases : Zm00001e034605

Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034605_P003
Cluster HCCA: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 UNE12,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G29950 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G51140 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G73830 BEE3 BR enhanced expression 3 0.02 OrthoFinder output from all 47 species
AT2G42280 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.01 OrthoFinder output from all 47 species
AT3G07340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G23690 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G57800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62090 PIL2, PIF6 phytochrome interacting factor 3-like 2 0.06 OrthoFinder output from all 47 species
AT4G28790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G28800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G34530 CIB1 cryptochrome-interacting basic-helix-loop-helix 1 0.02 OrthoFinder output from all 47 species
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g012121 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021895 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Adi_g085081 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Adi_g088431 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Adi_g115453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08203 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aev_g10642 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17229 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g17433 CIB1 regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Ala_g10304 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10601 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g33936 SPT bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Aob_g21168 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g07421 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04843.t2 LRL3, Aspi01Gene04843 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05629.t1 LRL3, Aspi01Gene05629 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08246.t1 Aspi01Gene08246 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12606.t2 Aspi01Gene12606 regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene13223.t1 HEC1, Aspi01Gene13223 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene33079.t1 UNE12, Aspi01Gene33079 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43944.t1 Aspi01Gene43944 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene59376.t1 HEC3, Aspi01Gene59376 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene67543.t1 SPT, Aspi01Gene67543 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g008895 UNE12 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Azfi_s0104.g044857 SPT bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s3754.g116756 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Cba_g15802 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16021 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Cba_g17686 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g44419 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68995 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70482 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.04G045500.1 Ceric.04G045500 bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.10G063500.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.16G026700.1 Ceric.16G026700 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.17G001900.1 CIB1, Ceric.17G001900 regulatory protein (CIB) of blue light perception &... 0.06 OrthoFinder output from all 47 species
Ceric.28G002800.1 Ceric.28G002800 regulatory protein (CIB) of blue light perception &... 0.07 OrthoFinder output from all 47 species
Dac_g01755 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16940 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dcu_g08844 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01271 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16677 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25483 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26546 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dde_g29020 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dde_g43893 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02749 PIL5, PIF1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03638 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g05767 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g18802 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g31834 SPT bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01008628001 No alias External stimuli response.light.UV-A/blue... 0.01 OrthoFinder output from all 47 species
GSVIVT01009479001 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.09 OrthoFinder output from all 47 species
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.01 OrthoFinder output from all 47 species
LOC_Os01g43680.3 LOC_Os01g43680 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
LOC_Os08g01700.1 HEC3, LOC_Os08g01700 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Len_g10068 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Len_g35329 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Lfl_g21546 UNE12 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26119 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_42080g0010 CIB1 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
MA_9198304g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mpzg01410.1 LRL3 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g11113 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15574 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g38615 RSL2 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g43243 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09354 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Nbi_g11634 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12274 SPT bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g16755 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31298 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g42592 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44492 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Ore_g44899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g01002 LRL1 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g10832 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18900 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g25271 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26288 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26340 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g34122 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.02 OrthoFinder output from all 47 species
Pnu_g08374 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33726 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39212 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63750 SPT bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006090 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013028 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0050.g013831 SPT bHLH-type transcription factor & original description: CDS=1-1485 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018070 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019660 SPT bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026567 No alias regulatory protein (CIB) of blue light perception &... 0.01 OrthoFinder output from all 47 species
Smo402301 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Solyc01g010130.4.1 Solyc01g010130 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc01g102300.3.1 PIF3, POC1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Solyc02g062690.3.1 BEE2, Solyc02g062690 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc02g091440.2.1 RHD6, Solyc02g091440 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Solyc03g034000.3.1 BEE2, Solyc03g034000 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Solyc03g044460.1.1 HEC2, Solyc03g044460 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc03g119390.4.1 BEE3, Solyc03g119390 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc03g121240.1.1 Solyc03g121240 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Solyc07g005400.3.1 LRL1, Solyc07g005400 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc12g098620.2.1 Solyc12g098620 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Spa_g05954 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10023 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Spa_g11218 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g26616 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g40542 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47496 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51778 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Tin_g24565 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003701_P003 Zm00001e003701 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e034339_P001 HEC1, Zm00001e034339 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e034528_P001 Zm00001e034528 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e035219_P001 Zm00001e035219 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e035422_P001 RSL4, Zm00001e035422 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 167 214
No external refs found!