Zm00001e035385_P002 (AtWRKY20, WRKY20,...)

Aliases : AtWRKY20, WRKY20, Zm00001e035385

Description : transcription factor (WRKY)

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e035385_P002

Target	Alias	Description	ECC score	Gene Family Method
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.02	OrthoFinder output from all 47 species
Adi_g058124	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Adi_g106399	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g34704	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g09958	WRKY1, ZAP1, ATWRKY1	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g21159	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23905	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g06558	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g22410	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.12G025600.1	AtWRKY20,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G001000.1	WRKY3, Ceric.13G001000	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.1Z119500.1	WRKY28,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g27360	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014854001	WRKY2, ATWRKY2	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
GSVIVT01026969001	ATWRKY24, WRKY24	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01030046001	AtWRKY20, WRKY20	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01037775001	AtWRKY20, WRKY20	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
Gb_32055	AtWRKY20, WRKY20	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
Gb_36273	AtWRKY20, WRKY20	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os07g39480.1	AtWRKY20,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Len_g50898	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g08941	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_120969g0010	WRKY4	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_16118g0010	WRKY2, ATWRKY2	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
Msp_g26331	WRKY3	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g16460	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g03099	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18284	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63011	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g26988	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	230	286
IPR003657	WRKY_dom	404	461

External Links

No external refs found!

Zm00001e035385_P002 (AtWRKY20, WRKY20,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation