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  5. Zm00001e035514_P002

Zm00001e035514_P002 (emb1354, CDC48C,...)


Aliases : emb1354, CDC48C, Zm00001e035514

Description : Cell division control protein 48 homolog C OS=Arabidopsis thaliana (sp|q9ss94|cd48c_arath : 644.0)


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035514_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00071550 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.03 OrthoFinder output from all 47 species
AMTR_s00072p00117380 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.03 OrthoFinder output from all 47 species
AT3G01610 emb1354, CDC48C cell division cycle 48C 0.03 OrthoFinder output from all 47 species
AT3G56690 CIP111 Cam interacting protein 111 0.03 OrthoFinder output from all 47 species
Adi_g080379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07270 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20264 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77518 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021463.10 No alias Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
Cre09.g398550 emb1354, CDC48C Cell division control protein 48 homolog C... 0.02 OrthoFinder output from all 47 species
Dac_g09762 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10601 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03992 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007689001 No alias Cell division cycle protein 48 homolog OS=Glycine max 0.05 OrthoFinder output from all 47 species
GSVIVT01010343001 emb1354, CDC48C Cell division control protein 48 homolog C... 0.03 OrthoFinder output from all 47 species
GSVIVT01025783001 CIP111 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os06g01980.1 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.05 OrthoFinder output from all 47 species
MA_10429450g0010 No alias Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
Ore_g03860 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19173 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40907 CDC48B platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01985 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16719 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18794 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12429 No alias platform ATPase CDC48 & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g13901 No alias platform ATPase CDC48 & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g068330.4.1 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.04 OrthoFinder output from all 47 species
Solyc05g012190.3.1 CDC48B, Solyc05g012190 Cell division control protein 48 homolog B... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 666 722
IPR041569 AAA_lid_3 383 454
IPR003959 ATPase_AAA_core 514 642
IPR003959 ATPase_AAA_core 215 359
No external refs found!