1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e036222_P001

Zm00001e036222_P001 (MSL10, ATMSL10, Zm00001e036222)


Aliases : MSL10, ATMSL10, Zm00001e036222

Description : mechanosensitive ion channel (MSL)


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036222_P001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT1G53470 MSL4 mechanosensitive channel of small conductance-like 4 0.04 OrthoFinder output from all 47 species
AT2G17000 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
Adi_g014541 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21251 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15328 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43785.t1 MSL5, Aspi01Gene43785 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009367 MSL6 mechanosensitive ion channel *(MSL) & original... 0.02 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G100500.1 MSL5, Ceric.02G100500 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g48251 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11186 MSL6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023963001 MSL6 Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
LOC_Os04g47320.1 MSL5, LOC_Os04g47320 mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species
Nbi_g24212 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13755 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Sam_g22988 No alias mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo81632 MSL5 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
Spa_g10758 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25971 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 496 701
No external refs found!