Aliases : At-RSZ22a, RSZ22a, Zm00001e036288
Description : RSZ21/22 RNA splicing factor
Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G24590 | At-RSZ22a, RSZ22a | RNA recognition motif and CCHC-type zinc finger domains... | 0.04 | OrthoFinder output from all 47 species | |
| AT4G31580 | RSZ22, At-RSZ22,... | serine/arginine-rich 22 | 0.03 | OrthoFinder output from all 47 species | |
| Cre09.g408200 | At-RSZ22a, RSZ22a | RNA processing.RNA splicing.spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00843 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g41811 | At-RSZ22a, RSZ22a | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033172001 | At-RSZ22a, RSZ22a | RNA processing.RNA splicing.spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g02610 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17168 | No alias | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01672 | At-RSZ22a, RSZ22a | RNA splicing factor *(RSZ21/22) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| No external refs found! |
