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  5. Zm00001e036449_P002

Zm00001e036449_P002 (DRT111, Zm00001e036449)


Aliases : DRT111, Zm00001e036449

Description : pre-mRNA splicing factor (SPF45/RBM17)


Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036449_P002

Target Alias Description ECC score Gene Family Method Actions
Cba_g01922 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
MA_9965663g0010 DRT111 pre-mRNA splicing factor (SPF45/RBM17) 0.03 OrthoFinder output from all 47 species
Ore_g10943 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015143 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR000467 G_patch_dom 230 269
No external refs found!